diff --git a/.gitignore b/.gitignore
deleted file mode 100644
index 2d560fb..0000000
--- a/.gitignore
+++ /dev/null
@@ -1,3 +0,0 @@
-.venv
-.virtual_documents
-.ipynb_checkpoints
diff --git a/__pycache__/MaskedReadoutDC.cpython-313.pyc b/__pycache__/MaskedReadoutDC.cpython-313.pyc
deleted file mode 100644
index 04d2a7b..0000000
Binary files a/__pycache__/MaskedReadoutDC.cpython-313.pyc and /dev/null differ
diff --git a/__pycache__/utils.cpython-313.pyc b/__pycache__/utils.cpython-313.pyc
deleted file mode 100644
index 96b1371..0000000
Binary files a/__pycache__/utils.cpython-313.pyc and /dev/null differ
diff --git a/output/SR-aligned-O4.h5df b/output/SR-aligned-O4.h5df
deleted file mode 100644
index 2faa1bb..0000000
Binary files a/output/SR-aligned-O4.h5df and /dev/null differ
diff --git a/output/SR-misaligned-O4.h5df b/output/SR-misaligned-O4.h5df
deleted file mode 100644
index d56eca8..0000000
Binary files a/output/SR-misaligned-O4.h5df and /dev/null differ
diff --git a/output/test.hdf5 b/output/test.hdf5
deleted file mode 100644
index bcacdab..0000000
Binary files a/output/test.hdf5 and /dev/null differ